FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012901

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012901
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences635496
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT2000.00999925417.4034167
CACGTCT2450.001596748417.0482439
ACACGTC2700.003055290815.4697028
CTCCCAC3650.001442716513.3663421
TCGTTAC3200.00942848513.0525618
TAGAAGC4500.006915184710.8415881
CCCCCCC1150.001976865310.496595110-114
Produced by FastQC (version 0.11.5)