FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012919

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012919
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences357932
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTTGCT2850.00332646815.27082351
CTCTTGA3050.005221089314.2694591
CCTGATT3650.001065621713.9110941
CCCATAT3300.00879542613.1884391
ATCAGTA4050.002332194712.5371581
ATTTTGG5851.8739836E-512.3716636
CATCAAT5800.002933130110.0050231
TCAAAAT9750.00316561397.42299842
Produced by FastQC (version 0.11.5)