FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012925

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012925
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences743149
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTCAA11954.008159E-57.94795231
CTTTCGG10850.00100185987.4070071
CTTGAAA14455.4482185E-57.07847931
AAAACGA10700.0080290626.74718058
CATCAAT12850.0059415236.2541651
ATTCAAA13050.0069749026.1583161
CTTTTTG14550.00322731826.0255691
TTCCATA15000.00516511455.77636342
CATCTGC16250.00198274875.7755865
Produced by FastQC (version 0.11.5)