FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012936

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012936
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences643297
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCAAT4654.1382964E-412.64761
CTCATTT6250.0048781339.4098151
AAAGTTG6350.0064657939.0931045
CAACAAT7950.00370048628.322361
Produced by FastQC (version 0.11.5)