FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012950

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012950
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences832316
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCACCT4050.002109009512.7094291
CTCCTCG9051.2467761E-59.7502481
CCCAGAT6859.5347594E-49.6612861
CAACAAG10004.0517152E-58.8239751
CTTTTAT16203.040241E-56.8086231
CTTTCAT13700.0015273316.4408581
CTCCTTC13200.00734637036.12776041
Produced by FastQC (version 0.11.5)