FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012954

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012954
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1577755
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGGT6100.00444609959.5178551
CTACTAT11400.0018200087.00271941
CTTAAAG15650.00119002166.0284811
CTTTCAT26258.871175E-75.8058911
CTCAAAA20700.00103715125.25895931
CCAAAAG18700.0097668625.0452261
Produced by FastQC (version 0.11.5)