FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012960

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012960
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1053501
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACAAG7803.9251745E-49.1697231
AAGTAAC9300.00234767077.65605936
CTATGAT10250.0058032076.97793531
ATCCGGG11300.0019326276.9624971
ATTCAAT14851.03171566E-46.74298861
CTTTGAT19408.329023E-55.89887331
CCTGAAA16750.0031795945.5511041
CAACAAA20852.346662E-45.488641
CTTTTTT49403.6379788E-125.3570491
Produced by FastQC (version 0.11.5)