FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012964

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012964
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences570793
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGGTCG900.00460783930.6842293
CGCACGA3455.3795706E-516.07961
GGGGGGG800.005666641514.098923140-144
GTCAGGG4300.00528908411.238996
AGATCGC4550.00805115710.6214646
CTTTTTT18400.00238673655.2761191
Produced by FastQC (version 0.11.5)