FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012971

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012971
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences717625
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTGTAC3700.001458987413.3468619
GTTCGGA4450.00567499711.133851
CTTCAAT9500.00306232347.45047241
CAGAAAT13050.00135672876.50845771
TTTCAAA18200.0098187165.04193162
Produced by FastQC (version 0.11.5)