FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012987

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012987
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1443185
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGTCG3950.002038978312.7677631
CCCCCTT5100.001066692211.3014351
CTCAGTA5200.001254731811.0841021
CCCGTAA7452.303102E-49.6706921
CCTCGAA9500.00257771357.5838591
ATCGAAC13653.2116503E-57.3691686
CTCCGTT11250.00170869877.0445621
Produced by FastQC (version 0.11.5)