FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012988

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012988
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1381842
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTAGG900.003638032632.2053261
CGTCCGT11850.00278070036.72642851
CTGGAAT16503.4230767E-46.1482891
CGAGGAC12950.00737844976.1258913
ATCCGAT14500.00341019315.9968541
GTTTTCG20151.2815653E-45.7256986
CCCGAAA19304.13156E-45.63176061
Produced by FastQC (version 0.11.5)