FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012991

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012991
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences512788
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCGTAG3200.00870885213.20976459
CTTGCTT4750.00952879810.382418
CACAAAA7700.0038727998.2798721
CTGAAAA12105.6814746E-47.0253461
CAAAAAA15600.0098153425.44914671
Produced by FastQC (version 0.11.5)