FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012996

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012996
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences606601
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGCAC1850.005376624419.3797451
CACACGT2000.008556941517.8804537
CTACTCC3200.00775321813.4446981
GTTCAAT4905.3782423E-513.1703171
GTCAGGG4750.00836471310.5670611
GAACTTG7400.0024801398.6985985
TCCAGAA10700.0087761186.6848322
Produced by FastQC (version 0.11.5)