FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005012999

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005012999
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences418246
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTATA951.078232E-437.849071
CCCGCGA1700.003238900821.1509531
CCCCCCC551.3189996E-418.31221695-99
GATCAAA3150.00698023313.6584516
CTAAAAT4705.4446876E-412.2405521
CTTCATT7602.8558666E-49.4622681
AAAGCTT8700.00113113278.2421684
Produced by FastQC (version 0.11.5)