FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013007

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013007
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1520895
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGAG4150.002781183712.2505461
CCCACTT8457.2022514E-59.4545641
CTATAAT10450.00603647346.95007041
AATCTTG12859.0350583E-46.74739555
AACATTG13650.00178941716.3519445
CCTCGCC18702.6106572E-45.8257941
AATACGC15600.00792470955.5579517
AATGTTC15600.00792470955.5579515
CTTGAAA19350.00252111425.25475651
Produced by FastQC (version 0.11.5)