FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013017

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013017
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences878585
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGATTAG1950.00848093817.9092374
GGACCTG4250.004478779611.4935765
AATTTCC12451.3911644E-57.84701975
TTATCTC9750.00449395047.1636952
CTTTGTA10600.0091490516.6567441
GTTTTTA12400.0058922076.25948671
ATTTCCG17001.2230157E-46.1572736
CTGAAAT13900.0028585226.09163951
AATATGA14750.00626065445.67721465
CTTCCGG18100.00156224725.45779471
Produced by FastQC (version 0.11.5)