FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013023

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013023
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences593086
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACGTA1900.006933168518.5449684
CCCAACT3255.4291316E-415.2091161
CCCAGAT4353.30995E-412.9864381
GATTTGG5800.00373155049.7201195
CAACGAA6400.0082503248.8267191
AAATTTT11950.00405680536.48685844
CAAAGAA16850.0039596695.44794561
Produced by FastQC (version 0.11.5)