FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013028

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013028
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences554416
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1550.002097405522.796387
ACACGTC2500.001652494216.9605058
CACGTCT2550.001886547216.6279479
GAGCACA2900.00444863814.6198064
CCCCAAA4750.00911253510.4454371
CTTTAAA7101.6677532E-49.9830661
CAAGAAA10700.0095774496.6242771
Produced by FastQC (version 0.11.5)