FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013038

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013038
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1193695
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTTGCT10350.00620781776.92975431
GGTAAAT12850.0072060596.1397081
GTTCCAT17005.7269505E-45.9065961
TTCCGTC18050.0013940665.5077172
AAATGCC17650.00648521455.2251756
GATTCTG17700.00670351465.2104145
Produced by FastQC (version 0.11.5)