FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013056

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013056
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences908466
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT4251.4463107E-515.1416787
CACGTCT3700.001318839413.5274749
GCACACG5057.33436E-512.7429966
ACACGTC4050.002602842412.3584348
AGCACAC6657.880812E-510.7522365
AGAGCAC6659.386451E-49.6780783
ATCGTTC8200.0062811247.84782088
CTTCAAA14601.0114996E-57.364781
AGATGGC10650.00841764556.71457624
CTGCAAC12850.0072424656.13636161
CCTGCAA18050.00745639955.16282651
Produced by FastQC (version 0.11.5)