FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013064

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013064
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1688181
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACTCGT8150.005704387.93330346
CTTCAAG21803.0646333E-86.940561
CAACTAT14053.521848E-46.66651341
CAATGTT18152.968849E-56.33304454
CTCCATT19951.1238224E-45.77841571
CTCCCAT15400.0070921585.6142571
CTTCAAT26454.0813607E-55.17558771
Produced by FastQC (version 0.11.5)