FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013078

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013078
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1159649
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAAAC6304.538824E-410.4744961
CTCTTAT9853.5129397E-58.9325651
CAACGAT11652.483331E-47.5524271
CATAGAA12505.575735E-47.03886131
CTCCAAA13109.5129776E-46.71647071
CACAAAA18159.961542E-45.65565061
GAAGATT20551.7741589E-45.5971932
CAAAAAG27601.0927972E-55.313151
ATTTGAT21550.00154425835.1035831
AGATTTT27206.721722E-55.02078774
Produced by FastQC (version 0.11.5)