FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013100

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013100
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences932447
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGATTG6550.0083470418.8151343
AGATACC8300.0064457857.8252486
CAAAGAG10900.00113466927.3213021
CTTTAAT14806.085164E-46.3724111
CTTTGAA16352.9928485E-46.21201321
CTTTTAT21256.173681E-66.1451951
CAAAGAA20157.255543E-45.4005541
Produced by FastQC (version 0.11.5)