FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013104

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013104
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences438484
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAG2050.00950001517.5574681
CTTTAAT7350.00219673928.8145651
GCTTTTA6500.0083388838.8142974
AAAATAC9452.8191064E-48.3353215
CTTTTTT16600.00263675195.6374281
Produced by FastQC (version 0.11.5)