FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013105

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013105
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences711907
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGTAGA6000.00440097411.5190735145
CTTCAGT5300.001667878210.7109841
CAATAAC6255.696667E-410.218281
ATTTGCC9603.9207334E-69.5558876
GATTTGC8106.5382966E-48.711925
ATTGAAT7850.00454228.1355721
CTTTTTA11200.00202617846.9306435
AGCCTTT10350.00721798326.82185652
Produced by FastQC (version 0.11.5)