FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013106

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013106
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences777664
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGCT4553.838206E-412.7616421
TTCGATT7750.00341811128.396332
GGGGGGG2151.0961444E-48.106032120-124
CATCAAT14105.1771967E-67.72147231
CTTTTAT13301.984303E-57.64019441
CAATAAT9900.00358481247.3314991
ATAAAGC10700.00794073756.75499876
CATCAAC11000.0099565766.5983491
CTCCTTT15550.00109796026.06793551
CATCTCC13400.0098174395.9582111
CTTCCAG17450.0043311545.40724331
CAAAAAT19300.00245478425.2650041
Produced by FastQC (version 0.11.5)