FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013126

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013126
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2412440
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCACT8407.3854765E-48.6077781
TAGATCC7550.00276849678.5957713
CTCGAAA13101.9245672E-68.2792371
CCCCAAT12305.446302E-47.0541781
GGTAGTT14003.231189E-46.7140661
GGTAATT23055.7704347E-76.27378131
GGTATAC13150.0084245096.04835461
GTTCAAG21759.538739E-65.98388961
GGTAAAC22351.4794385E-55.8232481
GGTACTT21404.7528723E-55.7438811
GGTAGAT17100.00357700165.49689631
CCTCAAT19856.221055E-45.4638791
TTTAAGT24004.802122E-55.4096312
CGAACAG21503.120724E-45.38086181
ACATATG17550.00502880945.34029776
GGTAAAG35907.817653E-85.23659751
CTTAAAT27801.5849026E-55.2018221
CTCCAGT18400.0084530315.10852861
GTCAAAT21250.00154582925.10390571
AACAATC28402.3936342E-55.07946542
Produced by FastQC (version 0.11.5)