FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013128

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013128
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences967315
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAATT6608.2002E-49.8218921
CTCGAAG7900.00420736248.2056311
ATTACGA8800.00121547688.184911
CTTCGAG9400.0023280257.6624691
CTCAAAT8500.0081163377.626411
TTTAATC10458.128612E-47.55435282
ATTTAAT12350.0045616476.41537861
CTTTCAA18052.6301585E-56.3846831
CTTCCAG18302.1743383E-45.903871
CTTCAAA16850.00313906465.55699541
Produced by FastQC (version 0.11.5)