FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013135

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013135
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1309930
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAACG2000.00964884617.5132796
GTCTCAA4909.5709227E-411.4486071
GGTTCAT10600.009723396.6153511
CCCATAT13150.0016459976.3990311
CAAACCA12550.0071911636.14105224
GTTTCAG17551.7726183E-45.9933951
ATTTAAT18500.00222826595.30658441
AATATTC26801.4487789E-55.22804455
TTTAATT23102.4126774E-45.1562122
Produced by FastQC (version 0.11.5)