FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013137

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013137
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1334102
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCGGG8054.2904489E-49.0889161
CTTTCGA7400.00202105668.898541
CCCAGAT14558.392399E-78.0457211
CTTAGAA8450.0066940087.7928041
CAACAGG12859.729063E-57.40198471
CTCAAAA16755.1959934E-56.55215931
CACCATT13950.00198388456.293831
CTCTGAT14050.00214976216.2490341
ATTGATT21550.0018768835.02917152
Produced by FastQC (version 0.11.5)