FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013153

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013153
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences983198
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAGCCT6350.00662521279.067059
CATAAAT13051.3513847E-47.20715331
CTTCAAC13852.8061986E-46.79085541
GATTTAC10600.0075662446.789255
CTGGAAT10750.0082332616.73011451
CTTCCAG18550.00155400935.46028141
Produced by FastQC (version 0.11.5)