FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013157

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013157
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3453485
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCAAT13850.00199757056.29072761
CTTCGAA26107.9325764E-75.841821
CCAATCG15450.00711490775.61304953
ATTACCC17050.00348021375.50985248
CTCAAGT18000.0062320135.24372961
GTTGAAT28402.1376269E-55.1130621
Produced by FastQC (version 0.11.5)