FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013159

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013159
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences720249
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAAAGT6204.2407244E-410.5507711
CTTGTTT9950.00371372477.3048331
CAAACAA10400.0057112656.9887591
CCATCTT11000.0098216116.6075541
CTTTCAA12300.0039738916.5001141
GGAGAAA16050.001780485.8278365
GTTTTTT17050.00323863845.5418191
CTTTTTT23601.9139165E-45.23564621
Produced by FastQC (version 0.11.5)