FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013161

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013161
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4236993
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCAGA17050.00335905545.52646351
CCAAGCC26305.772188E-65.5119161
CTTCGAC29501.3618373E-65.40541461
CCCAGAT35957.6541255E-85.242071
CTTCGAA28252.0096284E-55.13144731
CTCACAG22706.506607E-45.1088421
CCTCAAC27055.3671152E-55.09113551
CTTAATT33002.1323394E-65.05175451
CAACTGA28752.7213986E-55.0422051
Produced by FastQC (version 0.11.5)