FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013192

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013192
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences732117
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTAGTG3100.006500538413.8081017
CTCAAAG6456.046593E-410.1523421
CTTTAAT10306.483369E-58.4767121
ATTTGCT10156.3390506E-47.7316296
AATTTGC8550.0093097247.5096695
CTTTTAA10150.00446342777.16832071
CATCCAT11200.0014663897.1459191
TCAAAAC10700.0089983556.66791772
CTTCATT12500.00465244666.4027431
Produced by FastQC (version 0.11.5)