FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013200

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013200
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences672600
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTTAAC3653.177256E-617.7583276
TAACACC3250.00834602813.2959799
CAACTTT5902.7973246E-411.0361291
GCCTGGG5750.002902304810.0201587
CATGGAC7150.00170101619.0674623
CCCCCCC2004.4744267E-47.98906115-119
GGATTTT13750.00200492546.2867744
AAAAGAT13950.00235805756.1966413
CTTTTCC21550.00183891675.0358211
Produced by FastQC (version 0.11.5)