FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013204

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013204
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences939794
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAACA2900.003797593314.9735191
CTCGCCC6600.0086862168.7723651
GGGGGGG1350.009469578.681593125-129
CTCCGCC10750.0082069266.732281
TTTGCTT17306.8750646E-45.82241738
CTTTCAG17950.00624912465.2414271
Produced by FastQC (version 0.11.5)