FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013205

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013205
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences675533
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTATTG7000.00148306129.2049371
GTGGAAT8206.3964387E-48.7309691
CTTTGCT7900.0044388378.1562731
GTTTTAT11350.00200131866.93862061
CTTGAAA14708.9003224E-56.8184711
CTTGCCG13000.0011409536.60867261
Produced by FastQC (version 0.11.5)