FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1207200
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTCTGG6100.00460353969.4774576
ATTTAAG8500.0078829787.6516536
CGCATTC11602.7938175E-47.4757523
CTTTCCT14900.00415519355.89131981
CTTTTAT21602.8200413E-45.418561
CTTCAAA19800.00307116425.17226171
Produced by FastQC (version 0.11.5)