FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013211

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013211
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences613106
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCGAT3700.001256305513.6136741
CCCGATC3750.001414360813.4014612
AAGTAAG4200.003329652411.9577845
CAAGTCC5250.001403389810.9346143
TCGAGAA4850.00967258110.3619552
CGCAGAT7904.1904015E-49.1086071
CAAAAAA18250.00809712155.1257751
Produced by FastQC (version 0.11.5)