FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013214

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013214
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1004514
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTAGAT6150.0053673079.3022511
GTTTGCT9500.00277145887.52747961
CTTCAGG10000.00457289547.15110541
CCTTTAT14000.00266799386.1295191
CTGTAAA13200.0098065055.95925471
CTTTGAT17800.00651780665.22271731
Produced by FastQC (version 0.11.5)