FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013218

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013218
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1230551
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTGAG4850.00939261510.4044812
TCAATCA12250.00415579466.4732253
AATTCAT13650.00185390286.3317585
AAGTATT13700.00191244126.3142944
CGAAAAA23601.8756889E-45.24376151
AAAAAGT18450.0090246215.0793853
Produced by FastQC (version 0.11.5)