FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013225

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013225
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences655594
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTTAGT1400.001301038224.746451
GATGCGC7353.0135995E-49.4135587
GTTCAAA6850.00164004429.1038041
CGCCGTC9950.00599051036.9542644
CAAGAAA12500.00772700556.09752561
Produced by FastQC (version 0.11.5)