FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013227

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013227
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences426653
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCGGT3700.00123170513.6478278
CCCGAAT3350.00938812813.0596071
GTTGTCG4800.007977419510.6336021
CACAGCC5500.00197480610.4941052
AAGATTT7950.0043771118.16758253
AGCTTAA2700.00973486255.964205135-139
Produced by FastQC (version 0.11.5)