FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences725368
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGTAAC4700.007670555710.6916364
ATCAGTA7954.570319E-49.0303962
CTTCGCC8550.0074778187.69605641
CACCGAT8700.0087355257.5633661
CTTTTAA10350.00514717357.0640131
CTTCCAA10700.007105486.83294731
CTTTTTG19305.6077806E-56.0611431
ATCTTTT18152.0312287E-45.93278553
Produced by FastQC (version 0.11.5)