FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013242

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013242
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1500036
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAACTA3150.00707066513.63517954
GGTAAAT15752.1396662E-46.37605521
GTGAAAT17601.3518194E-46.11340481
ATCGGCT15050.0057757365.71938471
CTTTCAC15100.0059917645.70044661
CCAAAAT17709.575621E-45.67360831
CCCGGAT15550.0082860895.53548151
CTTTAAT19350.00294564155.18981171
Produced by FastQC (version 0.11.5)