FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013244

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013244
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1188379
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTACCT5950.00397478469.6475651
CTCCAAG8050.0051588338.0221611
CCCACAT8150.00576393637.9237291
CATCGAA12350.0047484416.39102361
CCTTTAT16654.3618094E-46.03334951
CATTTCC21556.9730144E-55.5998945
Produced by FastQC (version 0.11.5)