FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013254

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013254
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1454873
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTACCAT9700.00320765827.41636751
CTCCGAT10250.0054894597.0184161
CAAACAC10550.0072596526.818841
CTAAAAA20554.115085E-66.3012061
CACATTT18853.3947857E-45.71414043
CTTTTGT24801.4324771E-55.5114381
Produced by FastQC (version 0.11.5)