FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013262

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013262
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1975634
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAATC9350.0021645897.72037121
CCTCGAT14600.00384459375.9330521
CAACTAT16600.0025658615.6530791
CCCATCT15750.008900315.49984551
CACCAAT15750.008900315.49984551
CTTAAAA26253.4908568E-55.2248531
CTTCAAG23501.9996708E-45.2219271
Produced by FastQC (version 0.11.5)