FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005013265

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005013265
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences562180
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCATGGG2600.002174518316.2782652
GCACACG2800.00356829715.1128436
ATTCAAG5600.002772184610.0752296
GGATACC6450.0088813918.7474856
Produced by FastQC (version 0.11.5)